如何在每个波段/bin中以数据百分比作为标签绘制正态分布?

How to plot normal distribution with percentage of data as label in each band/bin?(如何在每个波段/bin中以数据百分比作为标签绘制正态分布?)

问题描述

在绘制数据的正态分布图时，我们如何使用 matplotlib/seaborn 或 plotly 在每个条带宽度为 1 个标准差的每个 bin 中放置如下图所示的标签?

While plotting normal distribution graph of data, how can we put labels like in image below for percentage of data in each bin where each band has a width of 1 standard deviation using matplotlib/seaborn or plotly ?

目前，我的绘图是这样的:

Currently, im plotting like this:

hmean = np.mean(data)
hstd = np.std(data)
pdf = stats.norm.pdf(data, hmean, hstd)
plt.plot(data, pdf)

推荐答案

虽然我已经标记了四分位数之间的百分比，但这段代码可能有助于对标准差做同样的事情.

Although I've labelled the percentages between the quartiles, this bit of code may be helpful to do the same for the standard deviations.

import numpy as np
import scipy
import pandas as pd
from scipy.stats import norm
import matplotlib.pyplot as plt
from matplotlib.mlab import normpdf

# dummy data
mu = 0
sigma = 1
n_bins = 50
s = np.random.normal(mu, sigma, 1000)

fig, axes = plt.subplots(nrows=2, ncols=1, sharex=True)

#histogram
n, bins, patches = axes[1].hist(s, n_bins, normed=True, alpha=.1, edgecolor='black' )
pdf = 1/(sigma*np.sqrt(2*np.pi))*np.exp(-(bins-mu)**2/(2*sigma**2))

median, q1, q3 = np.percentile(s, 50), np.percentile(s, 25), np.percentile(s, 75)
print(q1, median, q3)

#probability density function
axes[1].plot(bins, pdf, color='orange', alpha=.6)

#to ensure pdf and bins line up to use fill_between.
bins_1 = bins[(bins >= q1-1.5*(q3-q1)) & (bins <= q1)] # to ensure fill starts from Q1-1.5*IQR
bins_2 = bins[(bins <= q3+1.5*(q3-q1)) & (bins >= q3)]
pdf_1 = pdf[:int(len(pdf)/2)]
pdf_2 = pdf[int(len(pdf)/2):]
pdf_1 = pdf_1[(pdf_1 >= norm(mu,sigma).pdf(q1-1.5*(q3-q1))) & (pdf_1 <= norm(mu,sigma).pdf(q1))]
pdf_2 = pdf_2[(pdf_2 >= norm(mu,sigma).pdf(q3+1.5*(q3-q1))) & (pdf_2 <= norm(mu,sigma).pdf(q3))]

#fill from Q1-1.5*IQR to Q1 and Q3 to Q3+1.5*IQR
axes[1].fill_between(bins_1, pdf_1, 0, alpha=.6, color='orange')
axes[1].fill_between(bins_2, pdf_2, 0, alpha=.6, color='orange')

print(norm(mu, sigma).cdf(median))
print(norm(mu, sigma).pdf(median))

#add text to bottom graph.
axes[1].annotate("{:.1f}%".format(100*norm(mu, sigma).cdf(q1)), xy=((q1-1.5*(q3-q1)+q1)/2, 0), ha='center')
axes[1].annotate("{:.1f}%".format(100*(norm(mu, sigma).cdf(q3)-norm(mu, sigma).cdf(q1))), xy=(median, 0), ha='center')
axes[1].annotate("{:.1f}%".format(100*(norm(mu, sigma).cdf(q3+1.5*(q3-q1)-q3)-norm(mu, sigma).cdf(q3))), xy=((q3+1.5*(q3-q1)+q3)/2, 0), ha='center')
axes[1].annotate('q1', xy=(q1, norm(mu, sigma).pdf(q1)), ha='center')
axes[1].annotate('q3', xy=(q3, norm(mu, sigma).pdf(q3)), ha='center')

axes[1].set_ylabel('probability')

#top boxplot
axes[0].boxplot(s, 0, 'gD', vert=False)
axes[0].axvline(median, color='orange', alpha=.6, linewidth=.5)
axes[0].axis('off')

plt.subplots_adjust(hspace=0)
plt.show()

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